Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102189 | Not Available | Positive | 1043509 - 1043904 | 14552.7 |
| type i restriction enzyme, r subunit | SAMN04488094_102190 | Not Available | Positive | 1044062 - 1046440 | 89722.5 |
| type i restriction enzyme m protein | SAMN04488094_102191 | Not Available | Positive | 1046458 - 1048023 | 58981.9 |
| type i restriction enzyme, s subunit | SAMN04488094_102192 | Not Available | Positive | 1048023 - 1049174 | 42500.1 |
| hypothetical protein | SAMN04488094_102193 | Not Available | Positive | 1049171 - 1049752 | 21750.0 |
| three-cys-motif partner protein | SAMN04488094_102194 | Not Available | Negative | 1049773 - 1050684 | 33980.6 |
| protein gp37 | SAMN04488094_102195 | Not Available | Negative | 1050712 - 1051470 | 28832.3 |
| hypothetical protein | SAMN04488094_102196 | Not Available | Positive | 1052026 - 1052298 | 10173.0 |
| protein of unknown function | SAMN04488094_102197 | Not Available | Positive | 1052395 - 1052979 | 19935.7 |
| hypothetical protein | SAMN04488094_102198 | Not Available | Negative | 1053034 - 1053258 | 8143.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
