Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Large terminase subunit | SAMN04488094_102163 | Not Available | Negative | 1021178 - 1023181 | 74828.8 |
| hypothetical protein | SAMN04488094_102164 | Not Available | Negative | 1023129 - 1023725 | 21463.9 |
| Hypothetical protein | SAMN04488094_102165 | Not Available | Positive | 1023837 - 1024109 | 10189.0 |
| protein of unknown function | SAMN04488094_102166 | Not Available | Positive | 1024205 - 1024777 | 19782.6 |
| Hypothetical protein | SAMN04488094_102167 | Not Available | Negative | 1024831 - 1025055 | 8182.43 |
| dna (cytosine-5)-methyltransferase 1 | SAMN04488094_102168 | Not Available | Negative | 1025052 - 1025534 | 17600.9 |
| Is110-like element is621 family transposase | SAMN04488094_102169 | Not Available | Negative | 1025792 - 1026727 | 34326.5 |
| Dna cytosine methyltransferase | SAMN04488094_102170 | Not Available | Negative | 1026808 - 1027401 | 20613.7 |
| Dna methylase | SAMN04488094_102171 | Not Available | Negative | 1027403 - 1028767 | 49614.0 |
| hypothetical protein | SAMN04488094_102172 | Not Available | Negative | 1029184 - 1029564 | 14769.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
