Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102117 | Not Available | Negative | 975997 - 976227 | 8447.11 |
| hypothetical protein | SAMN04488094_102118 | Not Available | Negative | 976307 - 977071 | 26757.8 |
| abc-type cobalamin/fe3+-siderophores transport system, atpase component | SAMN04488094_102119 | Not Available | Negative | 977094 - 977951 | 31314.3 |
| hypothetical protein | SAMN04488094_102120 | Not Available | Negative | 978056 - 978538 | 17690.9 |
| hypothetical protein | SAMN04488094_102121 | Not Available | Negative | 978574 - 978921 | 12371.0 |
| helix-turn-helix domain-containing protein | SAMN04488094_102122 | Not Available | Negative | 978921 - 979187 | 10123.4 |
| hypothetical protein | SAMN04488094_102123 | Not Available | Negative | 979390 - 980073 | 26109.0 |
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN04488094_102124 | Not Available | Positive | 980190 - 980867 | 24968.9 |
| hypothetical protein | SAMN04488094_102125 | Not Available | Positive | 980870 - 981100 | 8585.14 |
| hypothetical protein | SAMN04488094_102126 | Not Available | Positive | 981097 - 981828 | 27379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
