Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10233 | Not Available | Negative | 905902 - 906387 | 17758.0 |
| helix-turn-helix domain-containing protein | SAMN04488094_10234 | Not Available | Negative | 906401 - 906610 | 8137.72 |
| sec-c motif-containing protein | SAMN04488094_10236 | Not Available | Negative | 906764 - 907927 | 42893.2 |
| hypothetical protein | SAMN04488094_10237 | Not Available | Negative | 908088 - 909017 | 33809.8 |
| hypothetical protein | SAMN04488094_10238 | Not Available | Negative | 909010 - 910236 | 45546.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488094_10239 | Not Available | Positive | 910398 - 910718 | 12386.5 |
| protein of unknown function | SAMN04488094_10240 | Not Available | Positive | 910715 - 911635 | 34191.9 |
| protein of unknown function | SAMN04488094_10241 | Not Available | Positive | 912034 - 912531 | 18913.7 |
| site-specific dna recombinase | SAMN04488094_10242 | Not Available | Positive | 912534 - 913862 | 49723.8 |
| hypothetical protein | SAMN04488094_10243 | Not Available | Positive | 913859 - 914260 | 15158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
