Algoriphagus aquimarinus strain DSM 23399

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus aquimarinus strain DSM 23399 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is a noteworthy trait in terms of its genomic structure. The strain is cataloged with the accession number FOKK00000000.1, indicating its availability for reference in microbial studies. The ecological significance of Algoriphagus aquimarinus lies in its adaptation to marine environments, where it likely plays a role in the degradation of organic matter, contributing to nutrient cycling. The aerobic nature of this bacterium suggests its involvement in processes that require oxygen, which may be crucial for maintaining the health of aquatic ecosystems. Given its non-motile characteristic, the strain may rely on water currents or other external forces to facilitate its distribution, influencing its interactions with surrounding microbial communities and the overall dynamics of the marine microbiome. Understanding the specific ecological roles of such bacteria can provide insights into the functional diversity of marine environments and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus aquimarinus
Strainstrain DSM 23399

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus aquimarinus strain DSM 23399


Gene Summary

Adenine Count

1527282 bp

Thymine Count

1526775 bp

Guanine Count

1025883 bp

Cytosine Count

1033579 bp

Genome Length

5119527 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integrase core domain-containing proteinSAMN04489723_1011Not AvailablePositive1 - 27510655.6
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive1 - 221218.01
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive31 - 155518.01
sugar phosphate isomerase/epimeraseSAMN04489723_1012Not AvailableNegative556 - 144333197.0
sugar lactone lactonase yvreSAMN04489723_1013Not AvailableNegative1470 - 234833461.0
sugar phosphate isomerase/epimeraseSAMN04489723_1014Not AvailableNegative2459 - 334633939.4
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04489723_1015Not AvailableNegative3371 - 416828644.5
l-iditol 2-dehydrogenaseSAMN04489723_1016Not AvailableNegative4170 - 520737071.6
3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomeraseSAMN04489723_1017Not AvailableNegative5220 - 591824641.0
membrane dipeptidaseSAMN04489723_1018Not AvailableNegative6259 - 732939259.5

Displaying genes 1 – 10 of 4417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.