Algoriphagus aquimarinus strain DSM 23399

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus aquimarinus strain DSM 23399 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is a noteworthy trait in terms of its genomic structure. The strain is cataloged with the accession number FOKK00000000.1, indicating its availability for reference in microbial studies. The ecological significance of Algoriphagus aquimarinus lies in its adaptation to marine environments, where it likely plays a role in the degradation of organic matter, contributing to nutrient cycling. The aerobic nature of this bacterium suggests its involvement in processes that require oxygen, which may be crucial for maintaining the health of aquatic ecosystems. Given its non-motile characteristic, the strain may rely on water currents or other external forces to facilitate its distribution, influencing its interactions with surrounding microbial communities and the overall dynamics of the marine microbiome. Understanding the specific ecological roles of such bacteria can provide insights into the functional diversity of marine environments and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus aquimarinus
Strainstrain DSM 23399

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus aquimarinus strain DSM 23399 genome assembly, contig:

Gene Summary

Adenine Count

1527282 bp

Thymine Count

1526775 bp

Guanine Count

1025883 bp

Cytosine Count

1033579 bp

Genome Length

5119527 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding protein 2SAMN04489723_10169Not AvailablePositive70028 - 7183067172.6
rod shape determining protein rodaSAMN04489723_10170Not AvailablePositive71830 - 7310447309.6
hd domain-containing proteinSAMN04489723_10171Not AvailableNegative73101 - 7367622126.0
hypothetical proteinSAMN04489723_10172Not AvailableNegative73698 - 7425821809.8
hypothetical proteinSAMN04489723_10173Not AvailableNegative74407 - 7551942248.8
ferredoxin, 2fe-2sSAMN04489723_10174Not AvailablePositive75553 - 7587912213.9
thymidine kinaseSAMN04489723_10175Not AvailablePositive75888 - 7647221733.2
dna replication and repair protein recoSAMN04489723_10176Not AvailablePositive76619 - 7730826025.7
transcription termination factor rhoSAMN04489723_10177Not AvailablePositive77515 - 7932367310.6
methionine adenosyltransferaseSAMN04489723_10178Not AvailableNegative79418 - 8067146416.3

Displaying genes 71 – 80 of 4417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.