Algoriphagus aquimarinus strain DSM 23399

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus aquimarinus strain DSM 23399 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is a noteworthy trait in terms of its genomic structure. The strain is cataloged with the accession number FOKK00000000.1, indicating its availability for reference in microbial studies. The ecological significance of Algoriphagus aquimarinus lies in its adaptation to marine environments, where it likely plays a role in the degradation of organic matter, contributing to nutrient cycling. The aerobic nature of this bacterium suggests its involvement in processes that require oxygen, which may be crucial for maintaining the health of aquatic ecosystems. Given its non-motile characteristic, the strain may rely on water currents or other external forces to facilitate its distribution, influencing its interactions with surrounding microbial communities and the overall dynamics of the marine microbiome. Understanding the specific ecological roles of such bacteria can provide insights into the functional diversity of marine environments and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus aquimarinus
Strainstrain DSM 23399

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus aquimarinus strain DSM 23399 genome assembly, contig:

Gene Summary

Adenine Count

1527282 bp

Thymine Count

1526775 bp

Guanine Count

1025883 bp

Cytosine Count

1033579 bp

Genome Length

5119527 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized zinc-type alcohol dehydrogenase-like proteinSAMN04489723_10139Not AvailablePositive37665 - 3871437872.5
nitroreductaseSAMN04489723_10140Not AvailableNegative38772 - 3937422893.3
mrna interferase mazfSAMN04489723_10141Not AvailableNegative39422 - 3974512394.5
transcriptional regulator/antitoxin, mazeSAMN04489723_10142Not AvailableNegative39736 - 399819305.13
3-methyladenine dna glycosylase alkdSAMN04489723_10143Not AvailableNegative40057 - 4077628037.9
outer membrane receptor proteins, mostly fe transportSAMN04489723_10144Not AvailableNegative40805 - 4324391749.2
histidine kinaseSAMN04489723_10145Not AvailablePositive43518 - 4550975430.0
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN04489723_10146Not AvailablePositive45502 - 4613723696.1
hypothetical proteinSAMN04489723_10147Not AvailablePositive46252 - 4652710813.9
uridine phosphorylaseSAMN04489723_10148Not AvailableNegative46541 - 4739831800.5

Displaying genes 41 – 50 of 4417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.