Algoriphagus aquimarinus strain DSM 23399

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus aquimarinus strain DSM 23399 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is a noteworthy trait in terms of its genomic structure. The strain is cataloged with the accession number FOKK00000000.1, indicating its availability for reference in microbial studies. The ecological significance of Algoriphagus aquimarinus lies in its adaptation to marine environments, where it likely plays a role in the degradation of organic matter, contributing to nutrient cycling. The aerobic nature of this bacterium suggests its involvement in processes that require oxygen, which may be crucial for maintaining the health of aquatic ecosystems. Given its non-motile characteristic, the strain may rely on water currents or other external forces to facilitate its distribution, influencing its interactions with surrounding microbial communities and the overall dynamics of the marine microbiome. Understanding the specific ecological roles of such bacteria can provide insights into the functional diversity of marine environments and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus aquimarinus
Strainstrain DSM 23399

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus aquimarinus strain DSM 23399 genome assembly, contig:

Gene Summary

Adenine Count

1527282 bp

Thymine Count

1526775 bp

Guanine Count

1025883 bp

Cytosine Count

1033579 bp

Genome Length

5119527 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
solute:na+ symporter, sss familySAMN04489723_10129Not AvailableNegative25263 - 2680755823.2
hypothetical proteinSAMN04489723_10130Not AvailablePositive27074 - 2847450578.2
short chain dehydrogenaseSAMN04489723_10131Not AvailableNegative28609 - 3016858468.1
hypothetical proteinSAMN04489723_10132Not AvailablePositive30364 - 3086720129.3
lysr family transcriptional regulator, hydrogen peroxide-inducible genes activatorSAMN04489723_10133Not AvailableNegative30902 - 3183135348.4
peroxiredoxin (alkyl hydroperoxide reductase subunit c)SAMN04489723_10134Not AvailablePositive31933 - 3249021007.7
alkyl hydroperoxide reductase subunit dSAMN04489723_10135Not AvailablePositive32578 - 3316821959.7
6-phosphogluconate dehydrogenaseSAMN04489723_10136Not AvailableNegative33445 - 3485751821.8
glucose-6-phosphate 1-dehydrogenaseSAMN04489723_10137Not AvailablePositive35053 - 3657958486.4
6-phosphogluconolactonaseSAMN04489723_10138Not AvailablePositive36804 - 3751726474.2

Displaying genes 31 – 40 of 4417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.