Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216290_0976 | Not Available | Positive | 1098907 - 1100058 | 42717.3 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05216290_0977 | Not Available | Positive | 1100048 - 1101130 | 41443.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216290_0978 | Not Available | Positive | 1101130 - 1102233 | 41504.9 |
| rhamnosyltransferase | SAMN05216290_0979 | Not Available | Negative | 1102230 - 1103126 | 34685.9 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05216290_0980 | Not Available | Negative | 1103123 - 1104553 | 52350.9 |
| capsule assembly protein wzi | SAMN05216290_0981 | Not Available | Negative | 1104553 - 1106193 | 62545.0 |
| hypothetical protein | SAMN05216290_0982 | Not Available | Negative | 1106200 - 1106886 | 25568.0 |
| capsule assembly protein wzi | SAMN05216290_0983 | Not Available | Positive | 1107072 - 1108574 | 56767.6 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN05216290_0984 | Not Available | Positive | 1108637 - 1110022 | 53816.0 |
| dtdp-glucose 4,6-dehydratase | SAMN05216290_0985 | Not Available | Negative | 1110053 - 1111039 | 37387.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
