Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN05216290_0966 | Not Available | Positive | 1086856 - 1087836 | 36763.1 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05216290_0967 | Not Available | Positive | 1087862 - 1088986 | 41306.7 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN05216290_0968 | Not Available | Positive | 1089058 - 1091622 | 94373.6 |
| chain length determinant protein | SAMN05216290_0969 | Not Available | Positive | 1091624 - 1092697 | 40351.9 |
| sulfotransferase domain-containing protein | SAMN05216290_0970 | Not Available | Positive | 1092707 - 1093624 | 34847.5 |
| hypothetical protein | SAMN05216290_0971 | Not Available | Positive | 1093609 - 1094523 | 34244.4 |
| hypothetical protein | SAMN05216290_0972 | Not Available | Positive | 1094532 - 1095947 | 52977.9 |
| gdpmannose 4,6-dehydratase | SAMN05216290_0973 | Not Available | Negative | 1095949 - 1096965 | 38134.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216290_0974 | Not Available | Positive | 1097095 - 1098222 | 43465.0 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05216290_0975 | Not Available | Positive | 1098215 - 1098889 | 24173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
