Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor (superfamily ii helicase) | SAMN05216290_0726 | Not Available | Positive | 773958 - 777302 | 126932.0 |
| hypothetical protein | SAMN05216290_0727 | Not Available | Negative | 777299 - 777880 | 22173.3 |
| two component transcriptional regulator, lyttr family | SAMN05216290_0728 | Not Available | Negative | 777882 - 778604 | 27946.6 |
| histidine kinase | SAMN05216290_0729 | Not Available | Negative | 778608 - 779765 | 44418.7 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | SAMN05216290_0730 | Not Available | Positive | 780068 - 781657 | 59224.5 |
| comf family protein | SAMN05216290_0731 | Not Available | Negative | 781706 - 782398 | 26130.1 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05216290_0732 | Not Available | Positive | 782430 - 782777 | 13088.8 |
| hypothetical protein | SAMN05216290_0733 | Not Available | Positive | 782779 - 783144 | 14253.5 |
| exodeoxyribonuclease-3 | SAMN05216290_0734 | Not Available | Positive | 783141 - 783899 | 29404.4 |
| hypothetical protein | SAMN05216290_0735 | Not Available | Positive | 783986 - 787360 | 129838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
