Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-binding srpbcc domain-containing protein | SAMN05216290_0686 | Not Available | Positive | 734247 - 734756 | 19202.2 |
| hypothetical protein | SAMN05216290_0687 | Not Available | Positive | 734962 - 735876 | 34746.8 |
| mrna interferase higb | SAMN05216290_0688 | Not Available | Positive | 736011 - 736304 | 11703.0 |
| hth-type transcriptional regulator / antitoxin higa | SAMN05216290_0689 | Not Available | Positive | 736307 - 736663 | 13821.9 |
| abc-2 type transport system atp-binding protein | SAMN05216290_0690 | Not Available | Negative | 736843 - 737541 | 26319.4 |
| hypothetical protein | SAMN05216290_0691 | Not Available | Negative | 737553 - 738992 | 54855.7 |
| peptidase family m28 | SAMN05216290_0692 | Not Available | Negative | 739036 - 739947 | 33868.9 |
| hypothetical protein | SAMN05216290_0693 | Not Available | Positive | 740020 - 741090 | 39919.3 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05216290_0694 | Not Available | Positive | 741250 - 742785 | 56925.4 |
| inosine/xanthosine triphosphatase | SAMN05216290_0695 | Not Available | Negative | 742912 - 743445 | 19010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
