Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_0636 | Not Available | Negative | 680699 - 681661 | 35726.8 |
| hypothetical protein | SAMN05216290_0637 | Not Available | Negative | 681867 - 682736 | 32470.9 |
| antitoxin pard1/3/4 | SAMN05216290_0638 | Not Available | Positive | 682845 - 683078 | 8883.43 |
| toxin pare1/3/4 | SAMN05216290_0639 | Not Available | Positive | 683078 - 683389 | 11896.1 |
| hypothetical protein | SAMN05216290_0640 | Not Available | Positive | 683407 - 683619 | 7772.62 |
| hypothetical protein | SAMN05216290_0641 | Not Available | Positive | 684030 - 684509 | 18201.0 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05216290_0642 | Not Available | Negative | 684937 - 687303 | 87812.9 |
| hypothetical protein | SAMN05216290_0643 | Not Available | Positive | 687590 - 687907 | 11739.9 |
| hypothetical protein | SAMN05216290_0644 | Not Available | Negative | 688031 - 688207 | 6877.02 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05216290_0645 | Not Available | Positive | 688229 - 692641 | 163946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
