Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_0576 | Not Available | Negative | 625904 - 626134 | 8125.13 |
| xtp/ditp diphosphohydrolase | SAMN05216290_0577 | Not Available | Positive | 626222 - 627034 | 31253.3 |
| chloride channel protein, cic family | SAMN05216290_0578 | Not Available | Positive | 627031 - 628797 | 64335.2 |
| ahpc/tsa family protein | SAMN05216290_0579 | Not Available | Positive | 629368 - 629979 | 22979.3 |
| gh3 auxin-responsive promoter | SAMN05216290_0580 | Not Available | Negative | 629976 - 631505 | 58062.0 |
| lipopolysaccharide export system atp-binding protein | SAMN05216290_0581 | Not Available | Negative | 631506 - 632237 | 27360.6 |
| exonuclease recj | SAMN05216290_0582 | Not Available | Negative | 632258 - 633958 | 62812.8 |
| hypothetical protein | SAMN05216290_0583 | Not Available | Negative | 634049 - 634702 | 25120.0 |
| fumarase, class ii | SAMN05216290_0584 | Not Available | Negative | 634742 - 636142 | 50429.1 |
| hypothetical protein | SAMN05216290_0585 | Not Available | Positive | 636378 - 636596 | 8452.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
