Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN05216290_0506 | Not Available | Negative | 560517 - 560747 | 8865.35 |
| methyltransferase domain-containing protein | SAMN05216290_0507 | Not Available | Negative | 560749 - 561438 | 25686.0 |
| hypothetical protein | SAMN05216290_0508 | Not Available | Negative | 561438 - 561701 | 10072.3 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05216290_0509 | Not Available | Negative | 561770 - 563881 | 77131.2 |
| hemolysin, contains cbs domains | SAMN05216290_0510 | Not Available | Negative | 563963 - 565246 | 48688.8 |
| hypothetical protein | SAMN05216290_0511 | Not Available | Negative | 565246 - 565455 | 8311.53 |
| lps export abc transporter protein lptc | SAMN05216290_0512 | Not Available | Negative | 565439 - 565993 | 21228.1 |
| hypothetical protein | SAMN05216290_0513 | Not Available | Negative | 566062 - 567381 | 49685.4 |
| hypothetical protein | SAMN05216290_0514 | Not Available | Negative | 567395 - 568864 | 53942.0 |
| anhydro-n-acetylmuramic acid kinase | SAMN05216290_0515 | Not Available | Positive | 569021 - 570088 | 38963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
