Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_0496 | Not Available | Positive | 550057 - 551238 | 44647.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216290_0497 | Not Available | Negative | 551235 - 552884 | 62389.8 |
| wd domain-containing protein, g-beta repeat-containing protein | SAMN05216290_0498 | Not Available | Negative | 553166 - 554098 | 34358.8 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05216290_0499 | Not Available | Negative | 554095 - 554880 | 28814.4 |
| predicted n-formylglutamate amidohydrolase | SAMN05216290_0500 | Not Available | Negative | 555057 - 555767 | 27269.8 |
| carboxylate-amine ligase | SAMN05216290_0501 | Not Available | Negative | 555746 - 557014 | 47391.7 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN05216290_0502 | Not Available | Negative | 557011 - 558462 | 55201.9 |
| peptidase_c39 like family protein | SAMN05216290_0503 | Not Available | Negative | 558459 - 559178 | 26877.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216290_0504 | Not Available | Positive | 559228 - 559824 | 23040.9 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05216290_0505 | Not Available | Negative | 559840 - 560517 | 24879.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
