Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | SAMN05216290_0486 | Not Available | Positive | 540476 - 541240 | 27681.0 |
| hypothetical protein | SAMN05216290_0487 | Not Available | Negative | 541306 - 541905 | 23278.3 |
| protein of unknown function | SAMN05216290_0488 | Not Available | Positive | 541904 - 542575 | 26671.8 |
| gtp-binding protein | SAMN05216290_0489 | Not Available | Negative | 542576 - 543883 | 49143.1 |
| gtp-binding protein era | SAMN05216290_0490 | Not Available | Negative | 543952 - 544839 | 33942.4 |
| Trna-met | Not Available | Not Available | Positive | 544930 - 545002 | Not Available |
| alpha-l-fucosidase | SAMN05216290_0492 | Not Available | Positive | 545152 - 546963 | 69087.6 |
| sugar phosphate isomerase/epimerase | SAMN05216290_0493 | Not Available | Positive | 547130 - 547987 | 32119.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216290_0494 | Not Available | Positive | 548060 - 548668 | 23020.7 |
| formiminoglutamase | SAMN05216290_0495 | Not Available | Positive | 548760 - 549896 | 42645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
