Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00425 | SAMN05216290_0436 | Not Available | Negative | 486577 - 486906 | Not Available |
| hypothetical protein | SAMN05216290_0437 | Not Available | Positive | 486981 - 487424 | 17017.3 |
| iron complex outermembrane recepter protein | SAMN05216290_0438 | Not Available | Positive | 487520 - 489901 | 88515.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05216290_0439 | Not Available | Negative | 489928 - 490650 | 26608.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216290_0440 | Not Available | Negative | 490792 - 491496 | 26828.3 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05216290_0441 | Not Available | Negative | 491489 - 493027 | 58121.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05216290_0442 | Not Available | Positive | 493193 - 494185 | 37494.6 |
| diaminopimelate decarboxylase | SAMN05216290_0443 | Not Available | Positive | 494288 - 495523 | 45852.0 |
| cytochrome c, mono-and diheme variants | SAMN05216290_0444 | Not Available | Positive | 495546 - 495962 | 15105.4 |
| hypothetical protein | SAMN05216290_0445 | Not Available | Positive | 496048 - 496962 | 33103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
