Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05216290_0416 | Not Available | Positive | 459231 - 460619 | 50867.7 |
| thiol:disulfide interchange protein dsbd | SAMN05216290_0417 | Not Available | Positive | 460633 - 462651 | 75190.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216290_0418 | Not Available | Positive | 462739 - 464028 | 48969.2 |
| nte family protein | SAMN05216290_0419 | Not Available | Positive | 464067 - 466421 | 88741.6 |
| outer membrane protein ompa | SAMN05216290_0420 | Not Available | Positive | 466511 - 468751 | 83794.4 |
| hypothetical protein | SAMN05216290_0421 | Not Available | Negative | 468755 - 469579 | 31444.7 |
| pepsy-associated tm region | SAMN05216290_0422 | Not Available | Positive | 469827 - 470360 | 19711.5 |
| uncharacterized protein involved in outer membrane biogenesis | SAMN05216290_0423 | Not Available | Positive | 470448 - 473177 | 98931.9 |
| hypothetical protein | SAMN05216290_0424 | Not Available | Positive | 473251 - 473475 | 8602.06 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05216290_0425 | Not Available | Negative | 473483 - 473992 | 17551.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
