Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s16p | SAMN05216290_0386 | Not Available | Positive | 426285 - 426848 | 20473.1 |
| 16s rrna processing protein rimm | SAMN05216290_0387 | Not Available | Positive | 426858 - 427400 | 19750.5 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05216290_0388 | Not Available | Positive | 427390 - 428067 | 25340.4 |
| lsu ribosomal protein l19p | SAMN05216290_0389 | Not Available | Positive | 428153 - 428515 | 13717.7 |
| hypothetical protein | SAMN05216290_0390 | Not Available | Positive | 428621 - 429043 | 15639.0 |
| diaminopimelate epimerase | SAMN05216290_0391 | Not Available | Positive | 429122 - 429895 | 27996.4 |
| protein translocase subunit seca | SAMN05216290_0392 | Not Available | Positive | 429962 - 433309 | 126329.0 |
| hypothetical protein | SAMN05216290_0393 | Not Available | Positive | 433302 - 433829 | 19894.7 |
| amidohydrolase | SAMN05216290_0394 | Not Available | Positive | 433826 - 435016 | 42753.8 |
| hypothetical protein | SAMN05216290_0395 | Not Available | Negative | 435100 - 435699 | 22670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
