Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05216290_0376 | Not Available | Positive | 410646 - 413084 | 92874.3 |
| response regulator receiver domain-containing protein | SAMN05216290_0377 | Not Available | Positive | 413140 - 414033 | 33783.9 |
| protein of unknown function | SAMN05216290_0378 | Not Available | Negative | 414089 - 414352 | 10392.4 |
| carbamoyl-phosphate synthase large subunit | SAMN05216290_0379 | Not Available | Negative | 414352 - 417165 | 104754.0 |
| hypothetical protein | SAMN05216290_0380 | Not Available | Positive | 417260 - 417772 | 18340.3 |
| hypothetical protein | SAMN05216290_0381 | Not Available | Negative | 417849 - 419492 | 56607.0 |
| hypothetical protein | SAMN05216290_0382 | Not Available | Positive | 419820 - 420287 | 17143.6 |
| dihydrolipoamide dehydrogenase | SAMN05216290_0383 | Not Available | Negative | 420291 - 421691 | 50808.4 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05216290_0384 | Not Available | Negative | 421728 - 423266 | 55042.4 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05216290_0385 | Not Available | Negative | 423278 - 426028 | 104183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
