Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 43 | SAMN05216290_0356 | Not Available | Positive | 385333 - 386418 | 40652.5 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN05216290_0357 | Not Available | Negative | 386413 - 387585 | 40693.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05216290_0358 | Not Available | Positive | 387825 - 388649 | 31029.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05216290_0359 | Not Available | Positive | 388762 - 390288 | 57246.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216290_0360 | Not Available | Negative | 390294 - 390974 | 25800.1 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05216290_0361 | Not Available | Negative | 390961 - 392484 | 56699.7 |
| glpgli family protein | SAMN05216290_0362 | Not Available | Positive | 392605 - 393459 | 31747.1 |
| outer membrane protein beta-barrel family protein | SAMN05216290_0363 | Not Available | Positive | 393493 - 396177 | 100351.0 |
| histidine kinase | SAMN05216290_0364 | Not Available | Positive | 396411 - 399215 | 106210.0 |
| two component transcriptional regulator, lyttr family | SAMN05216290_0365 | Not Available | Positive | 399205 - 399930 | 27559.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
