Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05216290_0329 | Not Available | Positive | 354499 - 355152 | 24863.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216290_0330 | Not Available | Positive | 355236 - 356465 | 46873.1 |
| hypothetical protein | SAMN05216290_0331 | Not Available | Negative | 356431 - 357717 | 49791.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216290_0332 | Not Available | Positive | 357762 - 358406 | 23767.4 |
| ribonuclease g | SAMN05216290_0333 | Not Available | Negative | 358455 - 360011 | 58474.9 |
| tetratricopeptide repeat-containing protein | SAMN05216290_0334 | Not Available | Negative | 360185 - 361003 | 30542.9 |
| dna-binding protein hu-beta | SAMN05216290_0335 | Not Available | Negative | 361028 - 361330 | 11179.5 |
| a/g-specific dna-adenine glycosylase | SAMN05216290_0336 | Not Available | Positive | 361486 - 362541 | 40114.9 |
| single-strand binding protein | SAMN05216290_0337 | Not Available | Positive | 362579 - 363025 | 16238.8 |
| gliding motility-associated protein glde | SAMN05216290_0338 | Not Available | Positive | 363047 - 364381 | 49671.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
