Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | SAMN05216290_0229 | Not Available | Negative | 253426 - 253617 | 6856.01 |
| phosphohistidine phosphatase | SAMN05216290_0230 | Not Available | Positive | 253698 - 254195 | 18861.4 |
| hypothetical protein | SAMN05216290_0231 | Not Available | Positive | 254323 - 254532 | 7821.88 |
| hypothetical protein | SAMN05216290_0232 | Not Available | Positive | 254538 - 254999 | 17466.5 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN05216290_0233 | Not Available | Negative | 255073 - 256479 | 52349.1 |
| hypothetical protein | SAMN05216290_0234 | Not Available | Negative | 256472 - 257506 | 38200.1 |
| atp-dependent lon protease | SAMN05216290_0235 | Not Available | Negative | 257539 - 260004 | 92354.9 |
| wd40-like beta propeller repeat | SAMN05216290_0236 | Not Available | Positive | 260163 - 262241 | 79608.0 |
| site-2 protease. metallo peptidase. merops family m50b | SAMN05216290_0237 | Not Available | Negative | 262238 - 263572 | 48912.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05216290_0238 | Not Available | Negative | 263578 - 264777 | 44088.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
