Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216290_0208 | Not Available | Negative | 231071 - 234136 | 113187.0 |
| transcriptional regulator, gntr family | SAMN05216290_0209 | Not Available | Negative | 234309 - 235046 | 27276.9 |
| cephalosporin hydroxylase | SAMN05216290_0211 | Not Available | Negative | 235513 - 236178 | 25052.3 |
| methyltransferase domain-containing protein | SAMN05216290_0212 | Not Available | Negative | 236185 - 236949 | 28838.2 |
| macrocin-o-methyltransferase (tylf) | SAMN05216290_0213 | Not Available | Negative | 236946 - 237758 | 30942.3 |
| glycosyltransferase | SAMN05216290_0214 | Not Available | Negative | 237959 - 238759 | 30471.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216290_0215 | Not Available | Negative | 238771 - 239736 | 35475.9 |
| nodulation protein z (nodz) | SAMN05216290_0216 | Not Available | Positive | 239984 - 241054 | 41100.9 |
| hypothetical protein | SAMN05216290_0217 | Not Available | Positive | 241051 - 242148 | 42727.0 |
| methyltransferase, fkbm family | SAMN05216290_0218 | Not Available | Positive | 242145 - 242990 | 32554.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
