Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, hexuronate transporter | SAMN05216290_0201 | Not Available | Negative | 221698 - 222960 | 46135.4 |
| cupin domain-containing protein | SAMN05216290_0202 | Not Available | Negative | 222985 - 223362 | 13840.4 |
| alginate lyase | SAMN05216290_0203 | Not Available | Negative | 223367 - 225610 | 83495.6 |
| poly(beta-d-mannuronate) lyase | SAMN05216290_0204 | Not Available | Negative | 225607 - 227868 | 82827.6 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 227943 - 228054 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 228178 - 231056 | 18.01 |
| alginate lyase | SAMN05216290_0205 | Not Available | Negative | 227894 - 228766 | 32621.2 |
| pkd domain-containing protein | SAMN05216290_0206 | Not Available | Negative | 228775 - 229626 | 30160.5 |
| starch-binding associating with outer membrane | SAMN05216290_0207 | Not Available | Negative | 229645 - 231060 | 52293.9 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 231667 - 233190 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
