Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted amidohydrolase | SAMN05216290_0181 | Not Available | Negative | 195687 - 197216 | 58684.1 |
| serine protease do | SAMN05216290_0182 | Not Available | Negative | 197609 - 198637 | 36493.4 |
| methyltransferase domain-containing protein | SAMN05216290_0183 | Not Available | Negative | 198677 - 199450 | 29236.1 |
| gwxtd domain-containing protein | SAMN05216290_0184 | Not Available | Positive | 199557 - 200771 | 47134.8 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN05216290_0185 | Not Available | Positive | 200771 - 201523 | 27419.9 |
| mannose-1-phosphate guanylyltransferase (gdp) | SAMN05216290_0186 | Not Available | Negative | 201520 - 202590 | 40012.5 |
| arabinose-5-phosphate isomerase | SAMN05216290_0187 | Not Available | Negative | 202614 - 203582 | 34953.6 |
| atp-dependent dna helicase recq | SAMN05216290_0188 | Not Available | Positive | 203656 - 205854 | 83830.1 |
| phosphoribosylamine--glycine ligase | SAMN05216290_0189 | Not Available | Positive | 205889 - 207178 | 46145.9 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05216290_0190 | Not Available | Positive | 207336 - 208643 | 49820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
