Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05216290_1881 | Not Available | Negative | 2070762 - 2072009 | 48134.2 |
| hypothetical protein | SAMN05216290_1882 | Not Available | Positive | 2072109 - 2072618 | 19451.1 |
| topoisomerase-4 subunit b | SAMN05216290_1883 | Not Available | Positive | 2072765 - 2074633 | 70480.9 |
| topoisomerase-4 subunit a | SAMN05216290_1884 | Not Available | Positive | 2074717 - 2077398 | 101362.0 |
| trna (guanosine-2'-o-)-methyltransferase | SAMN05216290_1885 | Not Available | Positive | 2077528 - 2078223 | 26778.8 |
| carboxypepd_reg-like domain-containing protein | SAMN05216290_1886 | Not Available | Positive | 2078306 - 2080819 | 95568.8 |
| threonyl-trna synthetase | SAMN05216290_1887 | Not Available | Positive | 2080930 - 2082888 | 73961.6 |
| bacterial translation initiation factor 3 (bif-3) | SAMN05216290_1888 | Not Available | Positive | 2082980 - 2083525 | 20926.8 |
| lsu ribosomal protein l35p | SAMN05216290_1889 | Not Available | Positive | 2083546 - 2083740 | 7385.32 |
| lsu ribosomal protein l20p | SAMN05216290_1890 | Not Available | Positive | 2083829 - 2084173 | 13157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
