Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05216290_1851 | Not Available | Negative | 2038936 - 2039922 | 36167.8 |
| 6-bladed beta-propeller protein | SAMN05216290_1852 | Not Available | Positive | 2040094 - 2041302 | 45126.0 |
| zinc protease | SAMN05216290_1853 | Not Available | Negative | 2041365 - 2044202 | 104391.0 |
| heat shock protein hslj | SAMN05216290_1854 | Not Available | Negative | 2044274 - 2044951 | 25180.9 |
| lipid-a-disaccharide synthase | SAMN05216290_1855 | Not Available | Positive | 2045065 - 2046201 | 43844.4 |
| cyclic nucleotide-binding domain-containing protein | SAMN05216290_1856 | Not Available | Positive | 2046213 - 2047613 | 51897.2 |
| thioredoxin reductase (nadph) | SAMN05216290_1857 | Not Available | Positive | 2047620 - 2049284 | 61014.9 |
| hypothetical protein | SAMN05216290_1858 | Not Available | Negative | 2049367 - 2049684 | 12309.8 |
| mannitol repressor | SAMN05216290_1859 | Not Available | Negative | 2049681 - 2050205 | 20397.2 |
| beta-lactamase | SAMN05216290_1860 | Not Available | Negative | 2050817 - 2051851 | 38863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
