Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216290_1831 | Not Available | Negative | 2017422 - 2020466 | 112295.0 |
| transposase zinc-ribbon domain-containing protein | SAMN05216290_1832 | Not Available | Negative | 2020728 - 2022587 | 73733.1 |
| histidinol-phosphate aminotransferase | SAMN05216290_1833 | Not Available | Positive | 2022866 - 2024050 | 43177.2 |
| hypothetical protein | SAMN05216290_1834 | Not Available | Positive | 2024082 - 2025215 | 41008.0 |
| hypothetical protein | SAMN05216290_1835 | Not Available | Negative | 2025328 - 2026158 | 32179.9 |
| pyridoxamine 5'-phosphate oxidase | SAMN05216290_1836 | Not Available | Negative | 2026211 - 2026756 | 20423.2 |
| creatinine amidohydrolase | SAMN05216290_1837 | Not Available | Negative | 2026796 - 2027563 | 29134.9 |
| transcriptional regulator, hxlr family | SAMN05216290_1838 | Not Available | Negative | 2027596 - 2027949 | 13438.2 |
| doxx-like family protein | SAMN05216290_1839 | Not Available | Positive | 2028046 - 2028420 | 13503.7 |
| 2og-fe(ii) oxygenase superfamily protein | SAMN05216290_1840 | Not Available | Negative | 2028421 - 2029026 | 23085.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
