Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein motb | SAMN05216290_1811 | Not Available | Negative | 1985989 - 1987029 | 38923.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216290_1812 | Not Available | Positive | 1987081 - 1987950 | 31406.0 |
| tetratricopeptide repeat-containing protein | SAMN05216290_1813 | Not Available | Positive | 1988182 - 1989801 | 62313.6 |
| tonb-dependent receptor | SAMN05216290_1814 | Not Available | Positive | 1989979 - 1992744 | 104128.0 |
| 3-phytase | SAMN05216290_1815 | Not Available | Positive | 1992794 - 1993873 | 39314.4 |
| tigr02646 family protein | SAMN05216290_1816 | Not Available | Negative | 1994109 - 1994753 | 25282.1 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05216290_1817 | Not Available | Negative | 1994750 - 1995994 | 46957.8 |
| gtp-binding protein | SAMN05216290_1818 | Not Available | Negative | 1996720 - 1998525 | 67400.8 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05216290_1819 | Not Available | Negative | 1999295 - 1999903 | 22819.1 |
| adenylate kinase | SAMN05216290_1820 | Not Available | Negative | 1999990 - 2000529 | 20594.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
