Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216290_1790 | Not Available | Negative | 1956539 - 1957039 | 19189.6 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05216290_1791 | Not Available | Positive | 1957576 - 1960833 | 122002.0 |
| pkhd-type hydroxylase | SAMN05216290_1792 | Not Available | Negative | 1960900 - 1961490 | 22077.0 |
| type ii protein arginine methyltransferase | SAMN05216290_1793 | Not Available | Negative | 1961493 - 1963250 | 64952.9 |
| pkhd-type hydroxylase | SAMN05216290_1794 | Not Available | Positive | 1963415 - 1964104 | 25231.5 |
| hypothetical protein | SAMN05216290_1795 | Not Available | Positive | 1964135 - 1965232 | 40325.4 |
| methionyl-trna formyltransferase | SAMN05216290_1796 | Not Available | Positive | 1965205 - 1966164 | 35614.4 |
| microcystin-dependent protein | SAMN05216290_1797 | Not Available | Positive | 1966305 - 1966910 | 21002.9 |
| microcystin-dependent protein | SAMN05216290_1798 | Not Available | Positive | 1966935 - 1967543 | 21085.8 |
| calx-beta domain-containing protein | SAMN05216290_1799 | Not Available | Positive | 1967978 - 1974031 | 204748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
