Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1750 | Not Available | Negative | 1915221 - 1915898 | 25413.7 |
| gh3 auxin-responsive promoter | SAMN05216290_1751 | Not Available | Positive | 1916013 - 1917569 | 59605.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05216290_1752 | Not Available | Positive | 1917569 - 1918189 | 22967.1 |
| hypothetical protein | SAMN05216290_1753 | Not Available | Positive | 1918308 - 1918904 | 21757.8 |
| hypothetical protein | SAMN05216290_1754 | Not Available | Negative | 1919070 - 1919951 | 34229.9 |
| hypothetical protein | SAMN05216290_1755 | Not Available | Negative | 1920038 - 1920967 | 35754.2 |
| mth538 tir-like domain | SAMN05216290_1756 | Not Available | Negative | 1920964 - 1921467 | 20027.0 |
| ca-activated chloride channel family protein | SAMN05216290_1757 | Not Available | Negative | 1921848 - 1922897 | 40013.0 |
| hypothetical protein | SAMN05216290_1758 | Not Available | Negative | 1922890 - 1923783 | 34618.6 |
| protein of unknown function duf58 | SAMN05216290_1759 | Not Available | Negative | 1923776 - 1924654 | 33500.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
