Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm domain-containing protein | SAMN05216290_1740 | Not Available | Positive | 1906985 - 1907857 | 32040.1 |
| tigr02757 family protein | SAMN05216290_1741 | Not Available | Positive | 1907858 - 1908640 | 30295.2 |
| orotate phosphoribosyltransferase | SAMN05216290_1742 | Not Available | Negative | 1908884 - 1909534 | 23602.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05216290_1743 | Not Available | Positive | 1909628 - 1910317 | 26638.8 |
| phosphopantetheine adenylyltransferase | SAMN05216290_1744 | Not Available | Negative | 1910305 - 1910760 | 17559.0 |
| protein of unknown function | SAMN05216290_1745 | Not Available | Negative | 1910770 - 1911633 | 33472.4 |
| hypothetical protein | SAMN05216290_1746 | Not Available | Negative | 1911637 - 1912215 | 22040.1 |
| 8-oxo-dgtp diphosphatase | SAMN05216290_1747 | Not Available | Negative | 1912291 - 1912785 | 18663.4 |
| exodeoxyribonuclease-5 | SAMN05216290_1748 | Not Available | Positive | 1912879 - 1914279 | 54081.7 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN05216290_1749 | Not Available | Negative | 1914769 - 1915146 | 13253.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
