Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase hii | SAMN05216290_1657 | Not Available | Negative | 1829745 - 1830341 | 22205.9 |
| nudix domain-containing protein | SAMN05216290_1658 | Not Available | Positive | 1830367 - 1830951 | 21782.8 |
| multidrug resistance protein, mate family | SAMN05216290_1659 | Not Available | Positive | 1830970 - 1832319 | 48633.2 |
| putative auto-transporter adhesin, head gin domain | SAMN05216290_1660 | Not Available | Positive | 1832369 - 1833070 | 25089.6 |
| uncharacterized membrane protein yhhn | SAMN05216290_1661 | Not Available | Negative | 1833239 - 1833913 | 25648.4 |
| predicted arabinose efflux permease, mfs family | SAMN05216290_1662 | Not Available | Negative | 1833913 - 1835103 | 42644.1 |
| hypothetical protein | SAMN05216290_1664 | Not Available | Negative | 1836277 - 1836864 | 22849.6 |
| hypothetical protein | SAMN05216290_1665 | Not Available | Negative | 1836887 - 1837369 | 17879.8 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05216290_1666 | Not Available | Negative | 1837432 - 1838496 | 39545.3 |
| cob(i)alamin adenosyltransferase | SAMN05216290_1667 | Not Available | Negative | 1838692 - 1839243 | 20507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
