Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1647 | Not Available | Negative | 1820666 - 1820941 | 10410.0 |
| hypothetical protein | SAMN05216290_1648 | Not Available | Negative | 1820938 - 1822164 | 48262.3 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05216290_1649 | Not Available | Positive | 1822165 - 1822617 | 16279.7 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05216290_1650 | Not Available | Positive | 1822620 - 1822961 | 13135.4 |
| hypothetical protein | SAMN05216290_1651 | Not Available | Positive | 1822964 - 1823824 | 31579.4 |
| beta-hydroxylase | SAMN05216290_1652 | Not Available | Positive | 1823950 - 1824756 | 31536.4 |
| 2-phosphosulfolactate phosphatase | SAMN05216290_1653 | Not Available | Negative | 1824753 - 1825451 | 25352.6 |
| aminomethyltransferase | SAMN05216290_1654 | Not Available | Negative | 1825519 - 1826607 | 39961.7 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05216290_1655 | Not Available | Positive | 1826759 - 1829146 | 89340.9 |
| putative lumazine-binding | SAMN05216290_1656 | Not Available | Positive | 1829274 - 1829738 | 17346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
