Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthetase, atp-grasp domain | SAMN05216290_1637 | Not Available | Negative | 1812131 - 1813015 | 33700.0 |
| aspartyl/asparaginyl beta-hydroxylase | SAMN05216290_1638 | Not Available | Positive | 1813091 - 1813666 | 22347.8 |
| carbamoyltransferase | SAMN05216290_1639 | Not Available | Negative | 1813647 - 1815332 | 62394.3 |
| hypothetical protein | SAMN05216290_1640 | Not Available | Negative | 1815329 - 1815808 | 17997.9 |
| iron-sulfur cluster assembly protein | SAMN05216290_1641 | Not Available | Negative | 1815820 - 1816134 | 11232.4 |
| hypothetical protein | SAMN05216290_1642 | Not Available | Positive | 1816235 - 1816756 | 20238.9 |
| protein of unknown function | SAMN05216290_1643 | Not Available | Positive | 1816758 - 1817177 | 15798.2 |
| thioredoxin | SAMN05216290_1644 | Not Available | Positive | 1817213 - 1817848 | 23878.0 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05216290_1645 | Not Available | Positive | 1817806 - 1818456 | 24758.9 |
| x-pro dipeptidyl-peptidase | SAMN05216290_1646 | Not Available | Negative | 1818778 - 1820598 | 66620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
