Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1607 | Not Available | Positive | 1779062 - 1779616 | 21040.9 |
| malate dehydrogenase (nad) | SAMN05216290_1608 | Not Available | Negative | 1779606 - 1780685 | 38686.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05216290_1609 | Not Available | Negative | 1780694 - 1781635 | 35132.7 |
| propionyl-coa carboxylase beta chain | SAMN05216290_1610 | Not Available | Positive | 1781775 - 1783361 | 57691.8 |
| putative aminopeptidase frvx | SAMN05216290_1611 | Not Available | Positive | 1783383 - 1784453 | 39619.1 |
| abc-type fe3+-hydroxamate transport system, substrate-binding protein | SAMN05216290_1612 | Not Available | Positive | 1784453 - 1785223 | 28991.2 |
| protein of unknown function | SAMN05216290_1613 | Not Available | Negative | 1785265 - 1785780 | 19527.2 |
| lysophospholipase l1 | SAMN05216290_1614 | Not Available | Negative | 1785974 - 1786633 | 24915.8 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN05216290_1615 | Not Available | Negative | 1786706 - 1787284 | 21768.8 |
| atp-binding cassette, subfamily b, msba | SAMN05216290_1616 | Not Available | Negative | 1787287 - 1788963 | 60707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
