Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN05216290_1537 | Not Available | Negative | 1721952 - 1723178 | 43816.0 |
| ceramidase | SAMN05216290_1538 | Not Available | Negative | 1723251 - 1723940 | 26501.9 |
| deoxyribodipyrimidine photo-lyase (single-stranded dna-specific) | SAMN05216290_1539 | Not Available | Negative | 1724059 - 1725327 | 49153.7 |
| deoxyribodipyrimidine photolyase-related protein | SAMN05216290_1540 | Not Available | Negative | 1725324 - 1726856 | 60512.4 |
| deoxyribodipyrimidine photo-lyase family protein (cryptochrome) | SAMN05216290_1541 | Not Available | Negative | 1727027 - 1728493 | 57140.5 |
| carboxypeptidase c (cathepsin a) | SAMN05216290_1542 | Not Available | Negative | 1728546 - 1730051 | 55628.2 |
| hypothetical protein | SAMN05216290_1543 | Not Available | Negative | 1730143 - 1730862 | 27566.6 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05216290_1544 | Not Available | Positive | 1731000 - 1732826 | 68773.2 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05216290_1545 | Not Available | Negative | 1732908 - 1735499 | 97769.5 |
| transcriptional regulator padr-like family protein | SAMN05216290_1546 | Not Available | Negative | 1735499 - 1735837 | 12415.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
