Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrilase | SAMN05216290_1517 | Not Available | Negative | 1700937 - 1701872 | 34812.5 |
| flotillin | SAMN05216290_1518 | Not Available | Negative | 1701872 - 1703431 | 56505.1 |
| hypothetical protein | SAMN05216290_1519 | Not Available | Negative | 1703442 - 1704020 | 21011.2 |
| hypothetical protein | SAMN05216290_1520 | Not Available | Negative | 1704139 - 1704903 | 28834.6 |
| hypothetical protein | SAMN05216290_1521 | Not Available | Negative | 1705313 - 1706527 | 44402.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216290_1522 | Not Available | Negative | 1706533 - 1707015 | 18154.7 |
| protein of unknown function | SAMN05216290_1523 | Not Available | Negative | 1707015 - 1707458 | 16027.0 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN05216290_1524 | Not Available | Negative | 1707461 - 1709206 | 63279.4 |
| outer membrane protein tolc | SAMN05216290_1525 | Not Available | Negative | 1709193 - 1710446 | 46748.2 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN05216290_1526 | Not Available | Negative | 1710443 - 1714192 | 137663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
