Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN05216290_1497 | Not Available | Negative | 1683480 - 1684526 | 39830.6 |
| putative abc transport system permease protein | SAMN05216290_1498 | Not Available | Positive | 1684915 - 1686147 | 45247.4 |
| recombination protein reca | SAMN05216290_1499 | Not Available | Negative | 1686242 - 1687258 | 36413.0 |
| putative aminopeptidase | SAMN05216290_1500 | Not Available | Positive | 1687351 - 1688388 | 39586.6 |
| protein of unknown function | SAMN05216290_1501 | Not Available | Positive | 1688431 - 1689243 | 31100.5 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05216290_1502 | Not Available | Positive | 1689306 - 1689992 | 25650.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05216290_1503 | Not Available | Positive | 1689997 - 1691097 | 41603.4 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05216290_1504 | Not Available | Positive | 1691107 - 1691814 | 27039.8 |
| lsu ribosomal protein l13p | SAMN05216290_1505 | Not Available | Positive | 1691992 - 1692435 | 16484.8 |
| small subunit ribosomal protein s9 | SAMN05216290_1506 | Not Available | Positive | 1692446 - 1692832 | 14441.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
