Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 | SAMN05216290_1486 | Not Available | Positive | 1673520 - 1674146 | 23085.1 |
| two component transcriptional regulator, luxr family | SAMN05216290_1487 | Not Available | Negative | 1674213 - 1674860 | 24242.6 |
| tetratricopeptide repeat-containing protein | SAMN05216290_1488 | Not Available | Negative | 1674853 - 1676586 | 65070.1 |
| hypothetical protein | SAMN05216290_1489 | Not Available | Negative | 1676579 - 1677070 | 18519.2 |
| protein of unknown function | SAMN05216290_1491 | Not Available | Negative | 1677593 - 1678324 | 26565.5 |
| sugar phosphate isomerase/epimerase | SAMN05216290_1492 | Not Available | Negative | 1678398 - 1679447 | 39405.2 |
| predicted dehydrogenase | SAMN05216290_1493 | Not Available | Negative | 1679448 - 1680593 | 42308.6 |
| nucleoside transporter | SAMN05216290_1494 | Not Available | Negative | 1680630 - 1681868 | 45524.2 |
| protein of unknown function | SAMN05216290_1495 | Not Available | Negative | 1681922 - 1682704 | 28831.2 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05216290_1496 | Not Available | Negative | 1682754 - 1683416 | 24814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
