Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-synthase | SAMN05216290_0141 | Not Available | Negative | 150979 - 152355 | 49983.4 |
| dna polymerase-4 | SAMN05216290_0142 | Not Available | Positive | 152595 - 153806 | 45705.6 |
| 2'-5' rna ligase | SAMN05216290_0143 | Not Available | Positive | 153827 - 154417 | 23270.3 |
| dna polymerase iii, alpha subunit | SAMN05216290_0144 | Not Available | Positive | 154426 - 157461 | 116747.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216290_0145 | Not Available | Positive | 157625 - 158215 | 22811.5 |
| hypothetical protein | SAMN05216290_0146 | Not Available | Positive | 158212 - 158961 | 27683.0 |
| chat domain-containing protein | SAMN05216290_0147 | Not Available | Negative | 158979 - 162035 | 116014.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05216290_0148 | Not Available | Positive | 162153 - 164960 | 102243.0 |
| hypothetical protein | SAMN05216290_0149 | Not Available | Positive | 165021 - 165446 | 15091.4 |
| outer membrane protein ompa | SAMN05216290_0150 | Not Available | Positive | 165539 - 166453 | 34055.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
