Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1476 | Not Available | Negative | 1662872 - 1663465 | 22477.1 |
| dna-binding transcriptional regulator, padr family | SAMN05216290_1477 | Not Available | Negative | 1663462 - 1663803 | 12569.5 |
| lyttr dna-binding domain-containing protein | SAMN05216290_1478 | Not Available | Positive | 1663911 - 1665641 | 65865.8 |
| lipoic acid synthetase | SAMN05216290_1479 | Not Available | Negative | 1665715 - 1666596 | 33395.2 |
| hypothetical protein | SAMN05216290_1480 | Not Available | Negative | 1666663 - 1667382 | 26296.5 |
| uncharacterized osmc-related protein | SAMN05216290_1481 | Not Available | Positive | 1667442 - 1667846 | 14645.6 |
| atp-binding cassette protein, chvd family | SAMN05216290_1482 | Not Available | Negative | 1668184 - 1669866 | 62937.1 |
| protein of unknown function | SAMN05216290_1483 | Not Available | Positive | 1669961 - 1671205 | 47585.1 |
| protein of unknown function | SAMN05216290_1484 | Not Available | Positive | 1671309 - 1671530 | 8711.8 |
| choline dehydrogenase | SAMN05216290_1485 | Not Available | Positive | 1671766 - 1673517 | 65423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
