Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1446 | Not Available | Positive | 1627574 - 1627792 | 8521.97 |
| alpha-glucosidase | SAMN05216290_1447 | Not Available | Positive | 1627856 - 1628686 | 30997.8 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05216290_1448 | Not Available | Positive | 1628997 - 1629869 | 34098.5 |
| putative abc transport system permease protein | SAMN05216290_1449 | Not Available | Negative | 1629870 - 1632368 | 92800.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216290_1450 | Not Available | Negative | 1632516 - 1633487 | 36639.5 |
| molecular chaperone htpg | SAMN05216290_1451 | Not Available | Negative | 1633598 - 1635493 | 71589.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05216290_1452 | Not Available | Positive | 1635711 - 1636241 | 19242.6 |
| protein of unknown function | SAMN05216290_1453 | Not Available | Negative | 1636316 - 1636816 | 18475.6 |
| trna pseudouridine38-40 synthase | SAMN05216290_1454 | Not Available | Positive | 1636952 - 1637716 | 28888.6 |
| atp-binding cassette, subfamily b | SAMN05216290_1455 | Not Available | Positive | 1637697 - 1639472 | 67225.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
