Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase d | SAMN05216290_1437 | Not Available | Positive | 1614764 - 1616641 | 71183.6 |
| protein of unknown function | SAMN05216290_1438 | Not Available | Positive | 1616675 - 1617607 | 34442.1 |
| dna polymerase-3 subunit gamma/tau | SAMN05216290_1439 | Not Available | Negative | 1617672 - 1618118 | 17353.6 |
| dna polymerase-3 subunit gamma/tau | SAMN05216290_1440 | Not Available | Negative | 1618346 - 1619458 | 41524.8 |
| putative endonuclease | SAMN05216290_1441 | Not Available | Negative | 1619960 - 1620196 | 9121.09 |
| Tmrna,resume consensus sequence (at 90): tttaaatggcgaaagaca | Not Available | Not Available | Positive | 1620403 - 1620770 | Not Available |
| beta-1,3-glucanase | SAMN05216290_1442 | Not Available | Negative | 1620848 - 1623259 | 86376.3 |
| transcriptional regulator, xre family | SAMN05216290_1443 | Not Available | Positive | 1623536 - 1623889 | 13323.2 |
| serine/threonine-protein kinase hipa | SAMN05216290_1444 | Not Available | Positive | 1623883 - 1625187 | 49046.8 |
| helix-turn-helix domain-containing protein | SAMN05216290_1445 | Not Available | Negative | 1625193 - 1627403 | 83596.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
