Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| linoleoyl-coa desaturase | SAMN05216290_1426 | Not Available | Negative | 1596946 - 1598046 | 42514.2 |
| co-chaperonin groes (hsp10) | SAMN05216290_1427 | Not Available | Negative | 1598253 - 1598630 | 14083.2 |
| por secretion system c-terminal sorting domain-containing protein/choice-of-anchor a domain-containing protein | SAMN05216290_1428 | Not Available | Negative | 1598715 - 1607246 | 297521.0 |
| dna recombination protein rmuc | SAMN05216290_1429 | Not Available | Negative | 1607501 - 1608820 | 50081.6 |
| 2-aminomuconate deaminase | SAMN05216290_1431 | Not Available | Negative | 1609568 - 1609981 | 15347.4 |
| acetyltransferase (gnat) family protein | SAMN05216290_1432 | Not Available | Negative | 1609982 - 1610419 | 16813.4 |
| xaa-pro aminopeptidase | SAMN05216290_1433 | Not Available | Negative | 1610421 - 1611713 | 49470.9 |
| heptosyltransferase-2 | SAMN05216290_1434 | Not Available | Negative | 1611779 - 1612771 | 37140.7 |
| predicted zn-dependent peptidase | SAMN05216290_1435 | Not Available | Positive | 1612891 - 1614126 | 46917.5 |
| predicted o-methyltransferase yrrm | SAMN05216290_1436 | Not Available | Positive | 1614126 - 1614764 | 24393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
