Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1416 | Not Available | Negative | 1588338 - 1588874 | 19869.5 |
| hypothetical protein | SAMN05216290_1417 | Not Available | Negative | 1588871 - 1589032 | 6250.39 |
| ornithine--oxo-acid transaminase | SAMN05216290_1418 | Not Available | Positive | 1589104 - 1590348 | 45432.3 |
| hypothetical protein | SAMN05216290_1419 | Not Available | Positive | 1590441 - 1590656 | 8056.78 |
| hypothetical protein | SAMN05216290_1420 | Not Available | Positive | 1590780 - 1591616 | 31176.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216290_1421 | Not Available | Negative | 1591726 - 1594599 | 105788.0 |
| protein of unknown function | SAMN05216290_1422 | Not Available | Positive | 1594696 - 1595337 | 24076.2 |
| transcriptional regulator | SAMN05216290_1423 | Not Available | Positive | 1595340 - 1595549 | 7534.4 |
| hypothetical protein | SAMN05216290_1424 | Not Available | Positive | 1595551 - 1595889 | 12252.6 |
| porphobilinogen synthase | SAMN05216290_1425 | Not Available | Positive | 1595902 - 1596870 | 35830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
