Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216290_1406 | Not Available | Negative | 1577539 - 1577694 | 5634.06 |
| lsu ribosomal protein l33p | SAMN05216290_1407 | Not Available | Negative | 1577697 - 1577879 | 7073.7 |
| sugar phosphate permease | SAMN05216290_1408 | Not Available | Negative | 1578006 - 1579214 | 43179.3 |
| hypothetical protein | SAMN05216290_1409 | Not Available | Negative | 1579352 - 1580182 | 31949.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216290_1410 | Not Available | Positive | 1580640 - 1583060 | 90764.8 |
| hypothetical protein | SAMN05216290_1411 | Not Available | Positive | 1583081 - 1584397 | 48171.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05216290_1412 | Not Available | Negative | 1584465 - 1584926 | 16781.9 |
| xaa-pro aminopeptidase | SAMN05216290_1413 | Not Available | Negative | 1585016 - 1586440 | 54117.3 |
| lsu ribosomal protein l28p | SAMN05216290_1414 | Not Available | Negative | 1586508 - 1586747 | 8943.99 |
| putative membrane protein | SAMN05216290_1415 | Not Available | Negative | 1586846 - 1588354 | 57588.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
