Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rimk-like atp-grasp domain-containing protein | SAMN05216290_1356 | Not Available | Positive | 1521313 - 1522395 | 41487.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05216290_1357 | Not Available | Positive | 1522392 - 1523018 | 22839.2 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05216290_1358 | Not Available | Positive | 1523022 - 1523705 | 26620.5 |
| putative auto-transporter adhesin, head gin domain | SAMN05216290_1359 | Not Available | Positive | 1523807 - 1524496 | 24753.0 |
| putative lumazine-binding | SAMN05216290_1360 | Not Available | Positive | 1524562 - 1525023 | 17197.7 |
| hypothetical protein | SAMN05216290_1361 | Not Available | Negative | 1525115 - 1525273 | 6091.16 |
| putative endonuclease | SAMN05216290_1362 | Not Available | Negative | 1525539 - 1525772 | 9012.8 |
| Trna-leu | Not Available | Not Available | Positive | 1525811 - 1525897 | Not Available |
| cell wall-active antibiotics response 4tms yvqf | SAMN05216290_1364 | Not Available | Positive | 1526025 - 1526711 | 25476.5 |
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN05216290_1365 | Not Available | Positive | 1526717 - 1528402 | 61460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
